Standings
Second stage| Pl | W | L | PCT | |||
| 1 | Scranton/WB | 65 | 38 | 27 | 364:306 | 0.585 |
| 2 | Rochester Red Wings | 67 | 39 | 28 | 399:317 | 0.582 |
| 3 | Indianapolis Indians | 67 | 38 | 29 | 339:291 | 0.567 |
| 4 | Syracuse Mets | 66 | 37 | 29 | 344:314 | 0.561 |
| 5 | Worcester | 65 | 36 | 29 | 370:315 | 0.554 |
| 6 | St. Paul | 67 | 36 | 31 | 334:346 | 0.537 |
| 7 | Nashville Sounds | 66 | 35 | 31 | 317:309 | 0.530 |
| 8 | Durham Bulls | 66 | 35 | 31 | 301:305 | 0.530 |
| 9 | Columbus Clippers | 65 | 34 | 31 | 384:351 | 0.523 |
| 10 | Gwinnett Stripers | 67 | 35 | 32 | 316:271 | 0.522 |
| 11 | Charlotte Knights | 67 | 35 | 32 | 324:306 | 0.522 |
| 12 | Toledo Mud Hens | 66 | 34 | 32 | 311:314 | 0.515 |
| 13 | Omaha Storm Chasers | 65 | 31 | 34 | 338:351 | 0.477 |
| 14 | Buffalo Bisons | 65 | 31 | 34 | 345:360 | 0.477 |
| 15 | Lehigh Valley IronPigs | 66 | 31 | 35 | 308:372 | 0.470 |
| 16 | Memphis Redbirds | 66 | 30 | 36 | 325:338 | 0.455 |
| 17 | Jacksonville Jumbo Shrimp | 66 | 28 | 38 | 324:365 | 0.424 |
| 18 | Iowa Cubs | 66 | 28 | 38 | 332:385 | 0.424 |
| 19 | Norfolk Tides | 63 | 26 | 37 | 278:333 | 0.413 |
| 20 | Louisville Bats | 67 | 23 | 44 | 256:352 | 0.343 |
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