Standings
Second stage| Pl | W | L | PCT | |||
| 1 | Rochester Red Wings | 68 | 40 | 28 | 406:323 | 0.588 |
| 2 | Indianapolis Indians | 69 | 40 | 29 | 350:297 | 0.580 |
| 3 | Scranton/WB | 66 | 38 | 28 | 370:313 | 0.576 |
| 4 | Syracuse Mets | 67 | 38 | 29 | 353:321 | 0.567 |
| 5 | Worcester | 67 | 37 | 30 | 383:329 | 0.552 |
| 6 | Durham Bulls | 68 | 37 | 31 | 310:308 | 0.544 |
| 7 | Charlotte Knights | 68 | 36 | 32 | 334:307 | 0.529 |
| 8 | St. Paul | 68 | 36 | 32 | 341:355 | 0.529 |
| 9 | Gwinnett Stripers | 69 | 36 | 33 | 319:275 | 0.522 |
| 10 | Toledo Mud Hens | 67 | 35 | 32 | 320:321 | 0.522 |
| 11 | Nashville Sounds | 68 | 35 | 33 | 320:318 | 0.515 |
| 12 | Columbus Clippers | 67 | 34 | 33 | 392:364 | 0.507 |
| 13 | Lehigh Valley IronPigs | 68 | 32 | 36 | 322:385 | 0.471 |
| 14 | Buffalo Bisons | 66 | 31 | 35 | 346:370 | 0.470 |
| 15 | Omaha Storm Chasers | 67 | 31 | 36 | 344:362 | 0.463 |
| 16 | Memphis Redbirds | 68 | 31 | 37 | 336:344 | 0.456 |
| 17 | Jacksonville Jumbo Shrimp | 68 | 29 | 39 | 328:368 | 0.426 |
| 18 | Iowa Cubs | 67 | 28 | 39 | 339:394 | 0.418 |
| 19 | Norfolk Tides | 65 | 27 | 38 | 284:344 | 0.415 |
| 20 | Louisville Bats | 69 | 25 | 44 | 269:360 | 0.362 |
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