2020
1/32-finals
| 1 | Kawasaki Frontale | Bye | |
| 9 | Blaublitz | Bye | |
| 13 | Niigata University | Fukui Utd. | 0 : 2 |
| 14 | Fuji Univ. | Reinmeer Aomori | 1 : 2 |
| 15 | Fukuyama City | Mizushima | 2 : 0 |
| 16 | Wakayama | Hirakata | 3 : 2 |
| 17 | Gamba Osaka | Bye | |
| 25 | Tokushima | Bye | |
| 29 | Kanoya University | Verspah Oita | 1 : 2 |
| 30 | Honda FC | Maruyasu Okazaki | 1 : 0 |
| 31 | Tsukuba Univ. | Tokyo Musashino City | 3 : 2 |
| 32 | Kochi United | FC Tokushima | 2 : 1 |
1/16-finals
| 1 | Kawasaki Frontale | Bye | |
| 5 | Blaublitz | Bye | |
| 7 | Fukui Utd. | Reinmeer Aomori | 2 : 1 |
| 8 | Fukuyama City | Wakayama | 2 : 1 |
| 9 | Gamba Osaka | Bye | |
| 13 | Tokushima | Bye | |
| 15 | Verspah Oita | Honda FC | 0 : 1 |
| 16 | Tsukuba Univ. | Kochi United | 3 : 2 |
1/8-finals
| 1 | Kawasaki Frontale | Bye | |
| 3 | Blaublitz | Bye | |
| 4 | Fukui Utd. | Fukuyama City | 0 : 3 |
| 5 | Gamba Osaka | Bye | |
| 7 | Tokushima | Bye | |
| 8 | Honda FC | Tsukuba Univ. | 2 : 1 |
Quarter-finals
| 1 | Kawasaki Frontale | Bye | |
| 2 | Blaublitz | Fukuyama City | 3 : 1 |
| 3 | Gamba Osaka | Bye | |
| 4 | Tokushima | Honda FC | 3 : 0 |
Semi-finals
| 1 | Kawasaki Frontale | Blaublitz | 2 : 0 |
| 2 | Gamba Osaka | Tokushima | 2 : 0 |
Final
| 1 | Kawasaki Frontale | Gamba Osaka | 1 : 0 |
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