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1/32-finals
1/16-finals
1/8-finals
Quarter-finals
Semi-finals
Final
2012/13
1/32-finals
| 1 | Zilina | Bye | |
| 2 | Bye | Ruzina | |
| 3 | Nemsova | Sala | 1 : 0 |
| 4 | Bye | Trencin | |
| 5 | Domino | Bye | |
| 6 | FKM Nove Zamky | Pohronie | 0 : 8 |
| 7 | Dun. Streda | Bye | |
| 8 | Bye | Senica | |
| 9 | Banska Bystrica | Bye | |
| 10 | Bye | Namestovo | |
| 11 | Lipany | Bye | |
| 12 | Haniska | Bardejov | 1 : 2 |
| 13 | Sered | Povazska Bystrica | 2 : 0 |
| 14 | Piestany | Moravany | 1 : 2 |
| 15 | AFC Nove Mesto | Bye | |
| 16 | Bye | Trnava | |
| 17 | VSS Kosice | Bye | |
| 18 | MSK Martin | Poprad | 1 : 3 |
| 19 | Lucenec | Michalovce | 1 : 0 |
| 20 | Bye | Lok. Kosice | |
| 21 | Nitra | Bye | |
| 22 | Samorin | Petrzalka | 1 : 3 |
| 23 | D. Luzna | Dubnica | 3 : 2 |
| 24 | Bye | Myjava | |
| 25 | Ruzomberok | Bye | |
| 26 | L. Mikulas | Rimavska Sobota | 0 : 2 |
| 27 | Kalinovo | Bye | |
| 28 | Bye | Presov | |
| 29 | Z. Moravce-Vrable | Bye | |
| 30 | Moldava | Podbrezova | 0 : 1 |
| 31 | SK Senec | Bye | |
| 32 | Bye | Slovan Bratislava |
1/16-finals
| 1 | Zilina | Ruzina | 2 : 0 |
| 2 | Nemsova | Trencin | 0 : 4 |
| 3 | Domino | Pohronie | 1 : 0 |
| 4 | Dun. Streda | Senica | 1 : 7 |
| 5 | Banska Bystrica | Namestovo | 1 : 0 |
| 6 | Lipany | Bardejov | 0 : 3 |
| 7 | Sered | Moravany | 2 : 1 |
| 8 | AFC Nove Mesto | Trnava | 1 : 3 |
| 9 | VSS Kosice | Poprad | 2 : 1 |
| 10 | Lucenec | Lok. Kosice | 1 : 2 |
| 11 | Nitra | Petrzalka | 3 : 0 |
| 12 | D. Luzna | Myjava | 0 : 2 |
| 13 | Ruzomberok | Rimavska Sobota | 4 : 1 |
| 14 | Kalinovo | Presov | 1 : 3 |
| 15 | Z. Moravce-Vrable | Podbrezova | 1 : 0 |
| 16 | SK Senec | Slovan Bratislava | 0 : 4 |
1/8-finals
| 1 | Zilina | Trencin | 3 : 1 |
| 2 | Domino | Senica | 0 : 4 |
| 3 | Banska Bystrica | Bardejov | 4 : 1 |
| 4 | Sered | Trnava | 2 : 3 |
| 5 | VSS Kosice | Lok. Kosice | 3 : 1 |
| 6 | Nitra | Myjava | 1 : 2 |
| 7 | Ruzomberok | Presov | 2 : 1 |
| 8 | Z. Moravce-Vrable | Slovan Bratislava | 2 : 3 |
Quarter-finals
| 1 | Zilina | Senica | 2 : 2, 2 : 1 |
| 2 | Banska Bystrica | Trnava | 1 : 3, 2 : 1 |
| 3 | VSS Kosice | Myjava | 1 : 3, 2 : 0 |
| 4 | Ruzomberok | Slovan Bratislava | 3 : 1, 0 : 2 |
Semi-finals
| 1 | Zilina | Trnava | 1 : 1, 3 : 2 |
| 2 | VSS Kosice | Slovan Bratislava | 1 : 3, 0 : 3 |
Final
| 1 | Zilina | Slovan Bratislava | 0 : 2 |
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