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1/32-finals
1/16-finals
1/8-finals
Quarter-finals
Semi-finals
Final
2016/17
1/32-finals
| 1 | Zapresic | Bye | |
| 2 | Gorica | Bijelo Brdo | 1 : 2 |
| 3 | Samobor | Medjimurec | 3 : 0 |
| 4 | Bye | Cibalia | |
| 5 | Bjelovar | Marsonia | 1 : 0 |
| 6 | Bye | NK Zagreb | |
| 7 | Veli Vrh | Zagorec K. | 2 : 0 |
| 8 | Bye | D. Zagreb | |
| 9 | RNK Split | Bye | |
| 10 | NK P. | Pleternica | 2 : 4 |
| 11 | Neretvanac | Suhopolje | 4 : 0 |
| 12 | Bye | Istra 1961 | |
| 13 | Solin | Zagora | 4 : 1 |
| 14 | Bye | Zadar | |
| 15 | Jalzabet | Primorac Biograd | 3 : 2 |
| 16 | Bye | Hajduk Split | |
| 17 | Lok. Zagreb | Bye | |
| 18 | Podravac Virje | Krk | 0 : 5 |
| 19 | Libertas | Otocac | 4 : 1 |
| 20 | Bye | Jaska Vinogradar | |
| 21 | Rudes | Oriolik | 3 : 1 |
| 22 | Bye | GOSK Dubrovnik | |
| 23 | Croatia Dakovo | Koprivnica | 1 : 0 |
| 24 | Bye | Rijeka | |
| 25 | Osijek | Bye | |
| 26 | Lekenik | Vukovar 1991 | 0 : 4 |
| 27 | Medjimurje Cakovec | Karlovac | 7 : 0 |
| 28 | Bye | Sibenik | |
| 29 | Novigrad | Kustosija | 3 : 1 |
| 30 | Bye | Zelina | |
| 31 | Varazdin | NK Slavonija Soljani | 3 : 2 |
| 32 | Bye | Slaven Belupo |
1/16-finals
| 1 | Zapresic | Bijelo Brdo | 3 : 2 |
| 2 | Samobor | Cibalia | 1 : 6 |
| 3 | Bjelovar | NK Zagreb | 4 : 0 |
| 4 | Veli Vrh | D. Zagreb | 0 : 5 |
| 5 | RNK Split | Pleternica | 2 : 1 |
| 6 | Neretvanac | Istra 1961 | 1 : 3 |
| 7 | Solin | Zadar | 1 : 0 |
| 8 | Jalzabet | Hajduk Split | 0 : 6 |
| 9 | Lok. Zagreb | Krk | 2 : 1 |
| 10 | Libertas | Jaska Vinogradar | 2 : 5 |
| 11 | Rudes | GOSK Dubrovnik | 3 : 0 |
| 12 | Croatia Dakovo | Rijeka | 0 : 3 |
| 13 | Osijek | Vukovar 1991 | 4 : 1 |
| 14 | Medjimurje Cakovec | Sibenik | 1 : 2 |
| 15 | Novigrad | Zelina | 4 : 0 |
| 16 | Varazdin | Slaven Belupo | 2 : 3 |
1/8-finals
| 1 | Zapresic | Cibalia | 1 : 0 |
| 2 | Bjelovar | D. Zagreb | 1 : 2 |
| 3 | RNK Split | Istra 1961 | 3 : 1 |
| 4 | Solin | Hajduk Split | 1 : 2 |
| 5 | Lok. Zagreb | Jaska Vinogradar | 2 : 1 |
| 6 | Rudes | Rijeka | 3 : 5 |
| 7 | Osijek | Sibenik | 2 : 1 |
| 8 | Novigrad | Slaven Belupo | 0 : 1 |
Quarter-finals
| 1 | Zapresic | D. Zagreb | 0 : 1 |
| 2 | RNK Split | Hajduk Split | 2 : 1 |
| 3 | Lok. Zagreb | Rijeka | 1 : 3 |
| 4 | Osijek | Slaven Belupo | 1 : 0 |
Semi-finals
| 1 | D. Zagreb | RNK Split | 0 : 0, 6 : 0 |
| 2 | Rijeka | Osijek | 2 : 0, 3 : 1 |
Final
| 1 | D. Zagreb | Rijeka | 1 : 3 |
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