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1/32-finals
1/16-finals
1/8-finals
Quarter-finals
Semi-finals
Final
2005/06
1/32-finals
| 1 | Swansea | Torquay | 3 : 1 |
| 2 | Southend | Rushden | 0 : 1 |
| 3 | Swindon | Stevenage | 2 : 0 |
| 4 | Bristol Rovers | Peterborough | 1 : 2 |
| 5 | Wycombe | Dag & Red | 2 : 1 |
| 6 | Crawley | Gillingham | 0 : 2 |
| 7 | Bournemouth | Aldershot | 4 : 1 |
| 8 | Bye | Walsall | |
| 9 | Cheltenham | Shrewsbury | 2 : 0 |
| 10 | Nottingham | Woking | 2 : 3 |
| 11 | Leyton Orient | Yeovil | 2 : 0 |
| 12 | Brentford | Oxford Utd | 1 : 2 |
| 13 | MK Dons | Exeter | 3 : 2 |
| 14 | Bristol City | Barnet | 2 : 3 |
| 15 | Northampton | Notts Co | 5 : 2 |
| 16 | Bye | Colchester | |
| 17 | Macclesfield | Chesterfield | 2 : 0 |
| 18 | Accrington | Rotherham | 2 : 3 |
| 19 | Doncaster | Barnsley | 5 : 2 |
| 20 | Chester | Cambridge Utd | 0 : 3 |
| 21 | Scunthorpe | Hartlepool | 1 : 0 |
| 22 | Bury | FC Halifax | 1 : 6 |
| 23 | Port Vale | Bye | |
| 24 | Mansfield | Hereford | 0 : 1 |
| 25 | Kidderminster | Darlington | 2 : 1 |
| 26 | Huddersfield | Boston Utd | 1 : 2 |
| 27 | Morecambe | Grimsby | 2 : 1 |
| 28 | Bye | Bradford City | |
| 29 | Tranmere | Lincoln | 2 : 1 |
| 30 | Stockport County | Rochdale | 1 : 3 |
| 31 | Blackpool | Wrexham | 4 : 3 |
| 32 | Oldham | Carlisle | 1 : 2 |
1/16-finals
| 1 | Swansea | Rushden | 4 : 0 |
| 2 | Swindon | Peterborough | 1 : 2 |
| 3 | Wycombe | Gillingham | 3 : 2 |
| 4 | Bournemouth | Walsall | 0 : 1 |
| 5 | Cheltenham | Woking | 5 : 1 |
| 6 | Leyton Orient | Oxford Utd | 0 : 1 |
| 7 | MK Dons | Barnet | 3 : 0 |
| 8 | Northampton | Colchester | 2 : 3 |
| 9 | Macclesfield | Rotherham | 2 : 1 |
| 10 | Doncaster | Cambridge Utd | 2 : 3 |
| 11 | Scunthorpe | FC Halifax | 3 : 1 |
| 12 | Port Vale | Hereford | 1 : 2 |
| 13 | Kidderminster | Boston Utd | 3 : 0 |
| 14 | Morecambe | Bradford City | 0 : 1 |
| 15 | Tranmere | Rochdale | 3 : 2 |
| 16 | Blackpool | Carlisle | 1 : 2 |
1/8-finals
| 1 | Swansea | Peterborough | 3 : 1 |
| 2 | Wycombe | Walsall | 2 : 3 |
| 3 | Cheltenham | Oxford Utd | 2 : 1 |
| 4 | MK Dons | Colchester | 1 : 2 |
| 5 | Macclesfield | Cambridge Utd | 4 : 2 |
| 6 | Scunthorpe | Hereford | 0 : 2 |
| 7 | Kidderminster | Bradford City | 2 : 1 |
| 8 | Tranmere | Carlisle | 0 : 1 |
Quarter-finals
| 1 | Swansea | Walsall | 3 : 2 |
| 2 | Cheltenham | Colchester | 0 : 1 |
| 3 | Macclesfield | Hereford | 2 : 0 |
| 4 | Kidderminster | Carlisle | 0 : 1 |
Semi-finals
| 1 | Swansea | Colchester | 2 : 1, 1 : 0 |
| 2 | Macclesfield | Carlisle | 2 : 1, 1 : 2 |
Final
| 1 | Swansea | Carlisle | 2 : 1 |
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