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1/32-finals
1/16-finals
1/8-finals
Quarter-finals
Semi-finals
Final
2009/10
1/32-finals
| 1 | Carlisle | Morecambe | 3 : 2 |
| 2 | Bye | Macclesfield | |
| 3 | Huddersfield | Rotherham | 2 : 1 |
| 4 | Burton | Chesterfield | 1 : 5 |
| 5 | Port Vale | Bye | |
| 6 | Crewe | Stockport County | 1 : 4 |
| 7 | Notts Co | Bye | |
| 8 | Rochdale | Bradford City | 1 : 2 |
| 9 | Accrington | Oldham | 2 : 1 |
| 10 | Bye | Shrewsbury | |
| 11 | Tranmere | Bye | |
| 12 | Walsall | Bury | 0 : 1 |
| 13 | Grimsby | Bye | |
| 14 | Bye | Hartlepool | |
| 15 | Darlington | Lincoln | 1 : 0 |
| 16 | Bye | Leeds | |
| 17 | MK Dons | Dag & Red | 3 : 1 |
| 18 | Bye | Southend | |
| 19 | Bournemouth | Yeovil | 2 : 1 |
| 20 | Wycombe | Northampton | 2 : 3 |
| 21 | Leyton Orient | Bye | |
| 22 | Bye | Brighton | |
| 23 | Aldershot | Bye | |
| 24 | Bristol Rovers | Hereford | 0 : 1 |
| 25 | Norwich | Brentford | 1 : 0 |
| 26 | Colchester | Gillingham | 1 : 2 |
| 27 | Exeter | Bye | |
| 28 | Bye | Swindon | |
| 29 | Charlton | Bye | |
| 30 | Millwall | Barnet | 0 : 2 |
| 31 | Torquay | Cheltenham | 3 : 1 |
| 32 | Bye | Southampton |
1/16-finals
| 1 | Carlisle | Macclesfield | 4 : 2 |
| 2 | Huddersfield | Chesterfield | 3 : 4 |
| 3 | Port Vale | Stockport County | 3 : 1 |
| 4 | Notts Co | Bradford City | 2 : 3 |
| 5 | Accrington | Shrewsbury | 2 : 0 |
| 6 | Tranmere | Bury | 1 : 2 |
| 7 | Grimsby | Hartlepool | 2 : 0 |
| 8 | Darlington | Leeds | 1 : 2 |
| 9 | MK Dons | Southend | 2 : 0 |
| 10 | Bournemouth | Northampton | 1 : 2 |
| 11 | Leyton Orient | Brighton | 1 : 0 |
| 12 | Aldershot | Hereford | 2 : 3 |
| 13 | Norwich | Gillingham | 1 : 0 |
| 14 | Exeter | Swindon | 1 : 2 |
| 15 | Charlton | Barnet | 4 : 1 |
| 16 | Torquay | Southampton | 2 : 3 |
1/8-finals
| 1 | Carlisle | Chesterfield | 3 : 1 |
| 2 | Port Vale | Bradford City | 2 : 3 |
| 3 | Accrington | Bury | 3 : 2 |
| 4 | Grimsby | Leeds | 1 : 3 |
| 5 | MK Dons | Northampton | 3 : 1 |
| 6 | Leyton Orient | Hereford | 1 : 2 |
| 7 | Norwich | Swindon | 1 : 0 |
| 8 | Charlton | Southampton | 1 : 2 |
Quarter-finals
| 1 | Carlisle | Bradford City | 3 : 0 |
| 2 | Accrington | Leeds | 0 : 2 |
| 3 | MK Dons | Hereford | 4 : 1 |
| 4 | Norwich | Southampton | 2 : 3 |
Semi-finals
| 1 | Carlisle | Leeds | 2 : 3, 2 : 1 |
| 2 | MK Dons | Southampton | 1 : 3, 0 : 1 |
Final
| 1 | Carlisle | Southampton | 1 : 4 |
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