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1/16-finals
1/8-finals
Quarter-finals
Semi-finals
Final
2006/07
1/16-finals
| 1 | Lokomotiv Moscow | FK Anzi Makhackala | 1 : 1, 4 : 2 |
| 2 | Luch | Dyn. Makhachkala | 3 : 0, 0 : 4 |
| 3 | Tomsk | Kirov | 2 : 1, 4 : 0 |
| 4 | Spartak Nizhniy Novgorod | Dynamo Moscow | 0 : 2, 1 : 3 |
| 5 | Zenit | Chita | 2 : 1, 2 : 1 |
| 6 | Yenisey | Saturn Ramenskoye | 1 : 2, 1 : 4 |
| 7 | FK Novosibirsk | Spartak Nalchik | 2 : 0, 1 : 1 |
| 8 | Ural | Spartak Moscow | 2 : 2, 0 : 1 |
| 9 | D. Bryansk | Shinnik Yaroslavl | 1 : 3, 2 : 0 |
| 10 | Fakel Voronezh | Torpedo Moscow | 1 : 3, 0 : 0 |
| 11 | Rubin Kazan | Zenit 2 | 2 : 0, 3 : 0 |
| 12 | Khimki | FK Rostov | 1 : 0, 0 : 2 |
| 13 | Krylya Sovetov | Kuban | 4 : 1, 1 : 1 |
| 14 | FK Saransk | CSKA Moscow | 1 : 0, 0 : 4 |
| 15 | Amkar | Angust Nazran | 2 : 1, 3 : 0 |
| 16 | Akhmat Grozny | FC Moscow | 0 : 4, 4 : 1 |
1/8-finals
| 1 | Lokomotiv Moscow | Dyn. Makhachkala | 3 : 0 |
| 2 | Tomsk | Dynamo Moscow | 1 : 0, 0 : 2 |
| 3 | Zenit | Saturn Ramenskoye | 1 : 1, 1 : 0 |
| 4 | FK Novosibirsk | Spartak Moscow | 1 : 3, 0 : 1 |
| 5 | D. Bryansk | Torpedo Moscow | 0 : 0, 1 : 0 |
| 6 | Rubin Kazan | FK Rostov | 0 : 1, 1 : 3 |
| 7 | Krylya Sovetov | CSKA Moscow | 2 : 0, 0 : 0 |
| 8 | Amkar | FC Moscow | 2 : 3, 0 : 3 |
Quarter-finals
| 1 | Lokomotiv Moscow | Dynamo Moscow | 4 : 0, 0 : 1 |
| 2 | Zenit | Spartak Moscow | 1 : 1, 1 : 2 |
| 3 | D. Bryansk | FK Rostov | 0 : 0, 2 : 1 |
| 4 | Krylya Sovetov | FC Moscow | 0 : 2, 2 : 3 |
Semi-finals
| 1 | Lokomotiv Moscow | Spartak Moscow | 2 : 1, 3 : 0 |
| 2 | D. Bryansk | FC Moscow | 0 : 1, 1 : 1 |
Final
| 1 | Lokomotiv Moscow | FC Moscow | 1 : 0 |
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